vtkPlusBrachyStepperPhantomRegistrationAlgo Class Reference

Phantom registration algorithm for image to probe calibration with brachy stepper. More...

#include <src/PlusCalibration/vtkBrachyStepperPhantomRegistrationAlgo/vtkPlusBrachyStepperPhantomRegistrationAlgo.h>

Inheritance diagram for vtkPlusBrachyStepperPhantomRegistrationAlgo:

Collaboration diagram for vtkPlusBrachyStepperPhantomRegistrationAlgo:

Public Types
typedef vtkObject	Superclass

Public Member Functions
virtual const char *	GetClassName ()
virtual char *	GetPhantomCoordinateFrame ()
virtual PlusStatus	GetPhantomToReferenceTransformMatrix (vtkMatrix4x4 *phantomToReferenceTransform)
virtual char *	GetReferenceCoordinateFrame ()
virtual int	IsA (const char *type)
virtual void	PrintSelf (ostream &os, vtkIndent indent) VTK_OVERRIDE
PlusStatus	ReadConfiguration (vtkXMLDataElement *aConfig)
virtual void	SetInputs (vtkIGSIOTrackedFrameList *trackedFrameList, double spacing[2], double centerOfRotationPx[2], vtkIGSIOTransformRepository *transformRepository, const std::vector< PlusNWire > &nWires)

Static Public Member Functions
static int	IsTypeOf (const char *type)
static vtkPlusBrachyStepperPhantomRegistrationAlgo *	New ()
static vtkPlusBrachyStepperPhantomRegistrationAlgo *	SafeDownCast (vtkObject *o)

Protected Member Functions
virtual vtkIGSIOTrackedFrameList *	GetTrackedFrameList ()
virtual void	SetCenterOfRotationPx (double, double)
void	SetCenterOfRotationPx (double [2])
virtual void	SetPhantomCoordinateFrame (const char *)
virtual void	SetReferenceCoordinateFrame (const char *)
virtual void	SetSpacing (double, double)
void	SetSpacing (double [2])
virtual void	SetTrackedFrameList (vtkIGSIOTrackedFrameList *)
void	SetTransformRepository (vtkIGSIOTransformRepository *)
virtual PlusStatus	Update ()
	vtkPlusBrachyStepperPhantomRegistrationAlgo ()
virtual	~vtkPlusBrachyStepperPhantomRegistrationAlgo ()

Protected Attributes
double	CenterOfRotationPx [2]
std::vector< PlusNWire >	NWires
char *	PhantomCoordinateFrame
vtkMatrix4x4 *	PhantomToReferenceTransformMatrix
char *	ReferenceCoordinateFrame
double	Spacing [2]
vtkIGSIOTrackedFrameList *	TrackedFrameList
vtkIGSIOTransformRepository *	TransformRepository
vtkTimeStamp	UpdateTime

Detailed Description

Phantom registration algorithm for image to probe calibration with brachy stepper.

This algorithm determines the phantom to reference transform (the spatial relationship between the phantom and the stepper coordinate system). The images shall be taken of a calibration phantom and the frames shall be segmented (the fiducial point coordinates shall be computed) before calling this algorithm.

Definition at line 31 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

Member Typedef Documentation

Superclass

typedef vtkObject vtkPlusBrachyStepperPhantomRegistrationAlgo::Superclass

Definition at line 36 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

Constructor & Destructor Documentation

vtkPlusBrachyStepperPhantomRegistrationAlgo()

vtkPlusBrachyStepperPhantomRegistrationAlgo::vtkPlusBrachyStepperPhantomRegistrationAlgo ( )

protected

Definition at line 36 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

~vtkPlusBrachyStepperPhantomRegistrationAlgo()

vtkPlusBrachyStepperPhantomRegistrationAlgo::~vtkPlusBrachyStepperPhantomRegistrationAlgo ( )

protectedvirtual

Definition at line 51 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

Member Function Documentation

GetClassName()

virtual const char* vtkPlusBrachyStepperPhantomRegistrationAlgo::GetClassName ( )

virtual

GetPhantomCoordinateFrame()

virtual char* vtkPlusBrachyStepperPhantomRegistrationAlgo::GetPhantomCoordinateFrame ( )

virtual

Get phantom coordinate frame

GetPhantomToReferenceTransformMatrix()

PlusStatus vtkPlusBrachyStepperPhantomRegistrationAlgo::GetPhantomToReferenceTransformMatrix ( vtkMatrix4x4 *  phantomToReferenceTransform )

virtual

Get phantom to reference transform

Definition at line 101 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

GetReferenceCoordinateFrame()

virtual char* vtkPlusBrachyStepperPhantomRegistrationAlgo::GetReferenceCoordinateFrame ( )

virtual

Get reference coordinate frame

GetTrackedFrameList()

virtual vtkIGSIOTrackedFrameList* vtkPlusBrachyStepperPhantomRegistrationAlgo::GetTrackedFrameList ( )

protectedvirtual

Get the input tracked frame list

IsA()

virtual int vtkPlusBrachyStepperPhantomRegistrationAlgo::IsA ( const char *  type )

virtual

IsTypeOf()

static int vtkPlusBrachyStepperPhantomRegistrationAlgo::IsTypeOf ( const char *  type )

static

New()

static vtkPlusBrachyStepperPhantomRegistrationAlgo* vtkPlusBrachyStepperPhantomRegistrationAlgo::New ( )

static

PrintSelf()

void vtkPlusBrachyStepperPhantomRegistrationAlgo::PrintSelf ( ostream &  os, vtkIndent  indent  )

virtual

Definition at line 65 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

ReadConfiguration()

PlusStatus vtkPlusBrachyStepperPhantomRegistrationAlgo::ReadConfiguration

(

vtkXMLDataElement *

aConfig

)

Read phantom definition (landmarks)

Parameters

aConfig

Root XML data element containing the tool calibration

Definition at line 262 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

SafeDownCast()

static vtkPlusBrachyStepperPhantomRegistrationAlgo* vtkPlusBrachyStepperPhantomRegistrationAlgo::SafeDownCast ( vtkObject *  o )

static

SetCenterOfRotationPx() [1/2]

virtual void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetCenterOfRotationPx ( double  , double    )

protectedvirtual

Set center of rotation in px

SetCenterOfRotationPx() [2/2]

void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetCenterOfRotationPx ( double  [2] )

protected

SetInputs()

void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetInputs ( vtkIGSIOTrackedFrameList *  trackedFrameList, double  spacing[2], double  centerOfRotationPx[2], vtkIGSIOTransformRepository *  transformRepository, const std::vector< PlusNWire > &  nWires  )

virtual

Set all algorithm inputs.

Parameters

trackedFrameList	Tracked frames with segmentation results
spacing	Image spacing (mm/px)
centerOfRotationPx	Ultrasound image rotation center in px
transformRepository	Transform repository to set the result into
nWires	Phantom definition structure

Definition at line 88 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

SetPhantomCoordinateFrame()

virtual void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetPhantomCoordinateFrame ( const char *  )

protectedvirtual

Set phantom coordinate frame

SetReferenceCoordinateFrame()

virtual void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetReferenceCoordinateFrame ( const char *  )

protectedvirtual

Set reference coordinate frame

SetSpacing() [1/2]

virtual void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetSpacing ( double  , double    )

protectedvirtual

Set spacing

SetSpacing() [2/2]

void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetSpacing ( double  [2] )

protected

SetTrackedFrameList()

virtual void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetTrackedFrameList ( vtkIGSIOTrackedFrameList *  )

protectedvirtual

Set the input tracked frame list

SetTransformRepository()

void vtkPlusBrachyStepperPhantomRegistrationAlgo::SetTransformRepository ( vtkIGSIOTransformRepository *  )

protected

Set input transform repository

Update()

PlusStatus vtkPlusBrachyStepperPhantomRegistrationAlgo::Update ( )

protectedvirtual

Bring this algorithm's outputs up-to-date.

Definition at line 117 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx.

Member Data Documentation

CenterOfRotationPx

double vtkPlusBrachyStepperPhantomRegistrationAlgo::CenterOfRotationPx[2]

protected

Rotation center position of the image in px

Definition at line 97 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

NWires

std::vector<PlusNWire> vtkPlusBrachyStepperPhantomRegistrationAlgo::NWires

protected

Phantom definition structure

Definition at line 103 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

PhantomCoordinateFrame

char* vtkPlusBrachyStepperPhantomRegistrationAlgo::PhantomCoordinateFrame

protected

Name of the phantom coordinate frame (eg. Phantom)

Definition at line 115 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

PhantomToReferenceTransformMatrix

vtkMatrix4x4* vtkPlusBrachyStepperPhantomRegistrationAlgo::PhantomToReferenceTransformMatrix

protected

Phantom to Reference transform

Definition at line 106 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

ReferenceCoordinateFrame

char* vtkPlusBrachyStepperPhantomRegistrationAlgo::ReferenceCoordinateFrame

protected

Name of the reference coordinate frame (eg. Reference)

Definition at line 118 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

Spacing

double vtkPlusBrachyStepperPhantomRegistrationAlgo::Spacing[2]

protected

Image spacing (mm/pixel). Spacing[0]: lateral axis, Spacing[1]: axial axis

Definition at line 94 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

TrackedFrameList

vtkIGSIOTrackedFrameList* vtkPlusBrachyStepperPhantomRegistrationAlgo::TrackedFrameList

protected

Tracked frame list with segmentation results

Definition at line 100 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

TransformRepository

vtkIGSIOTransformRepository* vtkPlusBrachyStepperPhantomRegistrationAlgo::TransformRepository

protected

Transform repository object into that the result is set

Definition at line 112 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

UpdateTime

vtkTimeStamp vtkPlusBrachyStepperPhantomRegistrationAlgo::UpdateTime

protected

When the results were computed. The result is recomputed only if the inputs changed more recently than UpdateTime.

Definition at line 109 of file vtkPlusBrachyStepperPhantomRegistrationAlgo.h.

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The documentation for this class was generated from the following files:

• src/PlusCalibration/vtkBrachyStepperPhantomRegistrationAlgo/vtkPlusBrachyStepperPhantomRegistrationAlgo.h
• src/PlusCalibration/vtkBrachyStepperPhantomRegistrationAlgo/vtkPlusBrachyStepperPhantomRegistrationAlgo.cxx